Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918549.1_cds_XP_016467993.1_60683
CDS Infomation

[gene=LOC107790564] [db_xref=GeneID:107790564] [protein=E3 ubiquitin-protein ligase RLIM-like] [protein_id=XP_016467993.1] [location=join(35604..35717,36401..37363,37446..37619,40282..40424,41008..41118,41225..41306)] [gbkey=CDS]
Sequence

ATGGGTTCAAGCAGTAGCCGTTTGGGGTCACACCCAAGTCGCCCAAATCGCACCAAATGC
ACATTTTCATCCATTTTCATATGTGGGGCTTCATCCTCTCGCTCAGCAATTGAGATGGAA
GATGATCCAGCTGAATTGCTGGTGGATGCTGCAGAACACGCTGACAAAGGAAAGCTCCAA
AACTCTGGGAAGGACCCGTCGGCTGATTTTATTCCCTCCCGAGCTGAACGTGGAGCTTCA
TCTGCGAGCAATTTGGTAAATAGTGAAAAATCTACATCTGGAGATGCTAATGTTCAGGGA
GGTAACCGAAGAGAAAACTCAACCAAAGACATGGAATTAGTCACTCGATATCGACCTGGA
AGTACAGGTTGTGAAACTGCTAGTACATCTCGAGACGACAGACCATTTCCCTATCCACTT
TCTTTAAACAAAAGGACAGAAAATGATGTTGTAAATAATGTTGATACTACAGCGAATGGA
GATGTCTCTCAAATATTTGCCGGGTCCTCTCGTTCTAGCAGTCCATTGTATCACGGAAAC
GGAGAATCTTCATCAAGTGAAGATTTTGTTGTAAATCATACAAATGAAATCCTTATCTTC
AATAATTCCGATTCTGGTTCTGTATCTGTTCTTTCGGATTCTTCACTTACGCCACATTTG
GCAGGAGATGATTTGCGTCAGGATACACCATCTTCAGGTCTCGAGTTTCTGGTGTCAGAA
AGGGAAGAGAGTTTAAGAGATGGAAGTATACTTCACGTTGATATGGCGAATGTCTCTCCC
AATGTTTTCTCTAATAGTCCTGCTGAAATAACTAGTCGCGAAGCAAGACGGAATAGTAGA
AGACTTTTTTGGGATTCTTTTTCAAGGAGAAGTCCTAGGAGGCGTGCTGATCCTCGGAAT
TTTCGTTTTCCANGTTTTCGTTTTCCAAATGATTATTCAGACAATGTAGCATCTCATGAC
AGGTTACTGCTGGACTTTAGCGATAATTCCCTTCATGAGGGGGCTGGAGGTAATTTTCCA
TCAAATGGAAGTCGGACTAGTGGGAGTAATGAACGGCGACGGCATTCCAGATCTGAGATG
TGGGAAAGACTTCCTGGTGGTCTTATTGCTGGTGATCATCGAAGTGCCACTTGTCCAACT
GGGATTCACGCAGATGGCCCATGTTCATGTGAGACAATTTTGATGAGTCGAGAAACTGGC
AGTCGTGCAAGTATATCACGAATAGTTATGCTTGCTGAGGCTTTGTTTGAGGTACTGGAT
GAAATACATCGGCAACCGATGTCAGTGTCCTTATCTGTGTTATCACTTCCAGCTCCAGAG
TCAGTTGTGGACTCGTTCCCGGTGAAGAGTTACTCAAAATCAGAGGAAGTAGATACCGGC
AACAATGTCCCACAGTGTCACATATGCTTAGCCGAGTATGAGGACGGAGATAAAATACGA
GTTCTACCTTGTCACCATGAGTTCCATGTATCATGCGTGGATAAATGGCTCAAAGAGATA
CACGGTGTATGTCCACTTTGCAGAGGAGATGTCCGAAATGGGTTTGTTGAAGGTTCAGTT
TCTAACTCAGCAGCACCTTCTCTTTGA

Peptide Sequence

PEP ID

XP_016467993.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tabacum]
Sequence

MGSSSSRLGSHPSRPNRTKCTFSSIFICGASSSRSAIEMEDDPAELLVDAAEHADKGKLQ
NSGKDPSADFIPSRAERGASSASNLVNSEKSTSGDANVQGGNRRENSTKDMELVTRYRPG
STGCETASTSRDDRPFPYPLSLNKRTENDVVNNVDTTANGDVSQIFAGSSRSSSPLYHGN
GESSSSEDFVVNHTNEILIFNNSDSGSVSVLSDSSLTPHLAGDDLRQDTPSSGLEFLVSE
REESLRDGSILHVDMANVSPNVFSNSPAEITSREARRNSRRLFWDSFSRRSPRRRADPRN
FRFPXFRFPNDYSDNVASHDRLLLDFSDNSLHEGAGGNFPSNGSRTSGSNERRRHSRSEM
WERLPGGLIAGDHRSATCPTGIHADGPCSCETILMSRETGSRASISRIVMLAEALFEVLD
EIHRQPMSVSLSVLSLPAPESVVDSFPVKSYSKSEEVDTGNNVPQCHICLAEYEDGDKIR
VLPCHHEFHVSCVDKWLKEIHGVCPLCRGDVRNGFVEGSVSNSAAPSL

Transcript Sequence

Gene sequence data has not been registered.